Statistic resources
- Statistiques et logiciel R : A practical website in french to address major questions with R. Great tutorials !
- Toptipbio : How to analyse qPCR results with multiple reference genes
- Statistics How To : A practical guide to solve most common statistic problems
- Experimental design : How to design correctly an experiment
- Multiple testing problem : When we test a lot of variables (ex: proteomics, methylomics,…)
- FDR : what is a false discovery rate and how to calculate it using the Benjamini-Hochberg procedure
- Power analysis : how and why to calculate the power of a test
- G*Power : Freeware to calculate a priori or a posteriori the power of your statistical analysis
Zebrafish resources
- Zetfin : the zebrafish model organism database
Mangrove rivulus resources
- NCBI : taxonomy browser for K. marmoratus
Ecotoxicology resources
- Visual MINTEQ
To calculate metal speciation in water - The Comparative Toxicogenomics Database
Integration of OMICS data to investigate how chemicals affect the environment and human health
Genomic resources
- JGI GOLD : genomes online database
- Ensembl genome browser 94
Proteomic resources
- bioEdit
Sequence alignment editor - PepLine
Software for protein identification and gene localization from tandem mass spectrometry data - EagleEye
Software for filtering MS/MS queries - PepNovo
High throughput de novo peptide sequencing tool for tandem mass spectrometry data - MS BLAST
MS BLAST sequence-similarity search engine - Uniprot
Comprehensive, high-quality and freely accessible resource of protein sequence and functional information - ExPASy
The bioinformatic resources portail - Pfam
To work on functional domains of proteins - Panther
Gene ontology tool - Blast2GO
Gene ontology tool - GOrilla
GOrilla is a tool for identifying and visualizing enriched GO terms in ranked lists of genes. - REViGO
REViGO is a web server that can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. - Brenda
Enzymes database - Proteomics Glossary
- KEGG
Pathway mapping
Other resources
- Mendeley
Free bibliography manager with possibilities to share huge database - ResearchGate
Social network of scientists - Dropbox
To automaticaly save and share files - Evernote
Useful software to take notes and classify them - Wunderlist
Freeware to manage a to do list and to schedule the tasks of a project - Biorender
To draw scientific illustrations for presentations and articles - DeepL
Better than Google Translate - Smash
To tranfer unlimited files for free
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